Blasted Bioinformatics!?
Bioinformatics lessons learned the hard way, bugs, gripes, and maybe topical paper reviews too...
2025-10-01
The case of the missing Editorial Blog Post (and journal team)
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Here’s a wee puzzle: A mature Open Data focused journal (“Journal A”), owned and launched by an company or Institute (“Institute B”), develo...
2025-05-20
What have you done to your keyboard?! Hands Down Promethium on a MacBook
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There were a few stickers on the lid, but why does my laptop look like this now? In short, I'm learning to touchtype a non-qwerty layou...
2024-06-07
FASTQ uploads to ENA FTP site with rclone
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I've recently been working what I considered to be a large scale FASTQ upload to the European Nucleotide Archive (ENA), from where it wi...
2024-02-02
BLAST max-target-seq meets metabarcoding
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This is my first blog post in years - primarily down to a second child who is now a toddler. And what better topic to return to than a mains...
2019-01-08
An overly aggressive optimization in BLASTN and MegaBLAST
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All my recent blog posts have been looking at issues raised by the recent letter Shah et al. (2018) "Misunderstood parameter of NCBI BL...
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