tag:blogger.com,1999:blog-8584629468471803075.post5239747104937791994..comments2024-01-31T12:30:28.282+00:00Comments on Blasted Bioinformatics!?: BLAST XML output needs more love from NCBIPeter Cockhttp://www.blogger.com/profile/00233221181317137855noreply@blogger.comBlogger3125tag:blogger.com,1999:blog-8584629468471803075.post-91405281527024766672015-06-23T19:54:49.135+01:002015-06-23T19:54:49.135+01:00FYI, looks like you can now generate the new XML2 ...FYI, looks like you can now generate the new XML2 format in a BLAST executable: http://www.ncbi.nlm.nih.gov/books/NBK131777/Nate Uhttps://www.blogger.com/profile/07604998134000908594noreply@blogger.comtag:blogger.com,1999:blog-8584629468471803075.post-69316628890216755692015-05-18T15:03:59.024+01:002015-05-18T15:03:59.024+01:00Your guess is as good as mine.
I'm more worri...Your guess is as good as mine.<br /><br />I'm more worried about the lose of a single XML output file for multiple-query searches (an Xinclude file and one XML file per query is going to be a pain for output to stdout etc).Peter Cockhttps://www.blogger.com/profile/00233221181317137855noreply@blogger.comtag:blogger.com,1999:blog-8584629468471803075.post-87754436859140885002015-05-18T13:58:50.714+01:002015-05-18T13:58:50.714+01:00Great that the new XML2 format includes taxonomy i...Great that the new XML2 format includes taxonomy info, especially taxid... But when can we expect a command-line executable with this feature? (thanks for your helpful blog!)Nate Uhttps://www.blogger.com/profile/07604998134000908594noreply@blogger.com